It sounds like you are doing this the right way.
I, too, had my amps worked on and when they came back, I wasn't informed that they had lowered the impedance considerably (like 100K to 20K), so, of course, the M5-HP's needed to be adjusted. Unfortunately, they only go to 22K ohms in balanced. The bass is just a teeny bit shy, but acceptable. In conversation with Johnny, it seems Mr. V. doesn't want to go to any lower setting-I forget why.
If the batteries were near the end, and you disconnected them for a prolonged period, then they possibly were drained by not having another source (your amp) to keep the crossovers charged.
Just thinkin'...
B